Index _ | A | B | C | D | E | F | G | H | I | J | K | L | M | N | O | P | R | S | T | U | V | X | Z _ __init__() (AnisotropyTOVSolver method) (BaseEOSConfig method) (BaseSamplerConfig method) (BaseTOVConfig method) (BijectiveTransform method) (BlackJAXNSAWConfig method) (BlackJAXNSAWSampler method) (BlackjaxSampler method) (BlackJAXSMCNUTSSampler method) (BlackJAXSMCRandomWalkSampler method) (BlackjaxSMCSampler method) (ChiEFTLikelihood method) (CombinedLikelihood method) (CombinePrior method) (ConstraintEOSLikelihood method) (ConstraintGammaLikelihood method) (ConstraintTOVLikelihood method) (Crust method) (EOSData method) (FamilyData method) (FlowMCSampler method) (FlowMCSamplerConfig method) (GRTOVConfig method) (GRTOVSolver method) (GWLikelihood method) (GWLikelihoodResampled method) (InferenceConfig method) (InferenceResult method) (Interpolate_EOS_model method) (JesterSampler method) (JesterTransform method) (LikelihoodBase method) (MetaModel_EOS_model method) (MetaModel_with_CSE_EOS_model method) (MetaModel_with_peakCSE_EOS_model method) (MetamodelCSEEOSConfig method) (MetamodelEOSConfig method) (NICERLikelihood method) (NtoMTransform method) (PostprocessingConfig method) (Prior method) (PriorConfig method) (RadioTimingLikelihood method) (REXLikelihood method) (SamplerOutput method) (ScalarTensorTOVSolver method) (SMCNUTSSamplerConfig method) (SMCRandomWalkSamplerConfig method) (SpectralDecomposition_EOS_model method) (SpectralEOSConfig method) (TOVSolution method) (TOVSolverBase method) (UniformPrior method) (ZeroLikelihood method) A adaptation_rate (SMCNUTSSamplerConfig attribute) add_derived_eos() (InferenceResult method) add_eos_from_transform() (InferenceResult method) add_name() (JesterSampler method) (Prior method) AnisotropyTOVSolver (class in jesterTOV.tov.anisotropy) B backward() (BijectiveTransform method) base_prior (CombinePrior attribute) BaseEOSConfig (class in jesterTOV.inference.config.schema) BaseSamplerConfig (class in jesterTOV.inference.config.schema) BaseTOVConfig (class in jesterTOV.inference.config.schema) BijectiveTransform (class in jesterTOV.inference.base.transform) BlackJAXNSAWConfig (class in jesterTOV.inference.config.schema) BlackJAXNSAWSampler (class in jesterTOV.inference.samplers.blackjax.nested_sampling.acceptance_walk) BlackjaxSampler (class in jesterTOV.inference.samplers.blackjax.base) BlackJAXSMCNUTSSampler (class in jesterTOV.inference.samplers.blackjax.smc.nuts) BlackJAXSMCRandomWalkSampler (class in jesterTOV.inference.samplers.blackjax.smc.random_walk) BlackjaxSMCSampler (class in jesterTOV.inference.samplers.blackjax.smc.base) C calculate_rest_mass_density() (in module jesterTOV.utils) ChiEFTLikelihood (class in jesterTOV.inference.likelihoods.chieft) cli_entry_point() (in module jesterTOV.inference.run_inference) CombinedLikelihood (class in jesterTOV.inference.likelihoods.combined) CombinePrior (class in jesterTOV.inference.base.prior) composite (Prior attribute) compute_b() (MetaModel_EOS_model method) compute_cs2() (MetaModel_EOS_model method) compute_energy() (MetaModel_EOS_model method) compute_f_1() (MetaModel_EOS_model method) compute_f_star() (MetaModel_EOS_model method) compute_f_star2() (MetaModel_EOS_model method) compute_f_star3() (MetaModel_EOS_model method) compute_pressure() (MetaModel_EOS_model method) compute_proton_fraction() (MetaModel_EOS_model method) compute_v() (MetaModel_EOS_model method) compute_x() (MetaModel_EOS_model method) config (BlackJAXNSAWSampler attribute) (BlackjaxSMCSampler attribute) config_dict (InferenceResult property) ConstraintEOSLikelihood (class in jesterTOV.inference.likelihoods.constraints) ConstraintGammaLikelihood (class in jesterTOV.inference.likelihoods.constraints) ConstraintTOVLikelihood (class in jesterTOV.inference.likelihoods.constraints) construct_eos() (Interpolate_EOS_model method) (MetaModel_EOS_model method) (MetaModel_with_CSE_EOS_model method) (MetaModel_with_peakCSE_EOS_model method) (SpectralDecomposition_EOS_model method) construct_eos_and_solve_tov() (JesterTransform method) construct_family() (TOVSolverBase method) counter (CombinedLikelihood attribute) (REXLikelihood attribute) (ZeroLikelihood attribute) Crust (class in jesterTOV.eos.crust) crust_name (BaseEOSConfig attribute) cs2 (Crust property) (EOSData attribute) cubic_root_for_proton_fraction() (in module jesterTOV.utils) cubic_spline() (in module jesterTOV.utils) cumtrapz() (in module jesterTOV.utils) D data (LikelihoodBase property) data_paths (InferenceConfig attribute) debug_nans (InferenceConfig attribute) determine_keep_names() (in module jesterTOV.inference.run_inference) dloge_dlogps (EOSData attribute) dry_run (InferenceConfig attribute) E e (Crust property) e0_geom (SpectralDecomposition_EOS_model attribute) EFT_high (ChiEFTLikelihood attribute) EFT_low (ChiEFTLikelihood attribute) enabled (PostprocessingConfig attribute) eos (InferenceConfig attribute) EOSData (class in jesterTOV.tov.data_classes) es (EOSData attribute) esym() (MetaModel_EOS_model method) evaluate() (ChiEFTLikelihood method) (CombinedLikelihood method) (ConstraintEOSLikelihood method) (ConstraintGammaLikelihood method) (ConstraintTOVLikelihood method) (GWLikelihood method) (GWLikelihoodResampled method) (LikelihoodBase method) (NICERLikelihood method) (RadioTimingLikelihood method) (REXLikelihood method) (ZeroLikelihood method) event_name (GWLikelihood attribute) (GWLikelihoodResampled attribute) experiment_name (REXLikelihood attribute) extra_constraints (EOSData attribute) F FamilyData (class in jesterTOV.tov.data_classes) fetch_params() (TOVSolverBase method) final_state (BlackJAXNSAWSampler attribute) (BlackjaxSMCSampler attribute) fixed_mass_samples (GWLikelihood attribute) flow (GWLikelihood attribute) (GWLikelihoodResampled attribute) FlowMCSampler (class in jesterTOV.inference.samplers.flowmc) FlowMCSamplerConfig (class in jesterTOV.inference.config.schema) forward() (JesterTransform method) (NtoMTransform method) from_config() (JesterTransform class method) from_sampler() (InferenceResult class method) G generate_eos_samples() (in module jesterTOV.inference.run_inference) get_crust_dir() (Crust class method) get_data() (Crust method) get_eos_type() (JesterTransform method) get_log_prob() (BlackJAXNSAWSampler method) (BlackjaxSMCSampler method) (FlowMCSampler method) (JesterSampler method) get_n_samples() (BlackJAXNSAWSampler method) (BlackjaxSMCSampler method) (FlowMCSampler method) (JesterSampler method) get_n_training_samples() (FlowMCSampler method) get_parameter_names() (JesterTransform method) get_required_parameters() (AnisotropyTOVSolver method) (GRTOVSolver method) (Interpolate_EOS_model method) (MetaModel_EOS_model method) (MetaModel_with_CSE_EOS_model method) (ScalarTensorTOVSolver method) (SpectralDecomposition_EOS_model method) (TOVSolverBase method) get_sampler_output() (BlackJAXNSAWSampler method) (BlackjaxSMCSampler method) (FlowMCSampler method) (JesterSampler method) get_samples() (BlackJAXNSAWSampler method) (BlackjaxSMCSampler method) (FlowMCSampler method) (JesterSampler method) get_training_sampler_output() (FlowMCSampler method) GRTOVConfig (class in jesterTOV.inference.config.schema) GRTOVSolver (class in jesterTOV.tov.gr) GWLikelihood (class in jesterTOV.inference.likelihoods.gw) GWLikelihoodResampled (class in jesterTOV.inference.likelihoods.gw) H hs (EOSData attribute) I InferenceConfig (class in jesterTOV.inference.config.schema) InferenceResult (class in jesterTOV.inference.result) init_step_size (SMCNUTSSamplerConfig attribute) injection_eos_path (PostprocessingConfig attribute) interp_in_logspace() (in module jesterTOV.utils) interpolate_eos() (Interpolate_EOS_model method) Interpolate_EOS_model (class in jesterTOV.eos.base) inverse() (BijectiveTransform method) inverse_transform_func (BijectiveTransform attribute) J JesterSampler (class in jesterTOV.inference.samplers.jester_sampler) JesterTransform (class in jesterTOV.inference.transforms.transform) K k2 (TOVSolution attribute) L lambdas (FamilyData attribute) learning_rate (FlowMCSamplerConfig attribute) likelihood (JesterSampler attribute) likelihood_transforms (JesterSampler attribute) LikelihoodBase (class in jesterTOV.inference.base.likelihood) LikelihoodConfig (in module jesterTOV.inference.config.schema) likelihoods (InferenceConfig attribute) likelihoods_list (CombinedLikelihood attribute) limit_by_MTOV() (in module jesterTOV.utils) list_available() (Crust class method) load() (InferenceResult class method) load_config() (in module jesterTOV.inference.config.parser) locate_lowest_non_causal_point() (in module jesterTOV.utils) log10pcs (FamilyData attribute) log_prob (SamplerOutput attribute) log_prob() (CombinePrior method) (Prior method) log_prob_batch_size (BaseSamplerConfig attribute) M M (TOVSolution attribute) m_min (RadioTimingLikelihood attribute) main() (in module jesterTOV.inference.run_inference) make_cornerplot (PostprocessingConfig attribute) make_cs2 (PostprocessingConfig attribute) make_histograms (PostprocessingConfig attribute) make_masslambda (PostprocessingConfig attribute) make_massradius (PostprocessingConfig attribute) make_pressuredensity (PostprocessingConfig attribute) mass_matrix_base (SMCNUTSSamplerConfig attribute) mass_matrix_param_scales (SMCNUTSSamplerConfig attribute) masses (FamilyData attribute) max_density (Crust property) max_mcmc (BlackJAXNSAWConfig attribute) max_nbreak_nsat (MetamodelCSEEOSConfig attribute) max_proposals (BlackJAXNSAWConfig attribute) mean (RadioTimingLikelihood attribute) metadata (BlackJAXNSAWSampler attribute) (BlackjaxSMCSampler attribute) (SamplerOutput attribute) MetaModel_EOS_model (class in jesterTOV.eos.metamodel) MetaModel_with_CSE_EOS_model (class in jesterTOV.eos.metamodel) MetaModel_with_peakCSE_EOS_model (class in jesterTOV.eos.metamodel) MetamodelCSEEOSConfig (class in jesterTOV.inference.config.schema) MetamodelEOSConfig (class in jesterTOV.inference.config.schema) min_density (Crust property) min_nsat_TOV (BaseTOVConfig attribute) model (LikelihoodBase property) model_config (BaseEOSConfig attribute) (BaseSamplerConfig attribute) (BaseTOVConfig attribute) (BlackJAXNSAWConfig attribute) (FlowMCSamplerConfig attribute) (GRTOVConfig attribute) (InferenceConfig attribute) (MetamodelCSEEOSConfig attribute) (MetamodelEOSConfig attribute) (PostprocessingConfig attribute) (PriorConfig attribute) (SMCNUTSSamplerConfig attribute) (SMCRandomWalkSamplerConfig attribute) (SpectralEOSConfig attribute) model_dir (GWLikelihood attribute) (GWLikelihoodResampled attribute) mu (EOSData attribute) mu_lowest (Crust property) N n (Crust property) n_chains (FlowMCSamplerConfig attribute) n_delete_frac (BlackJAXNSAWConfig attribute) n_dim (Prior property) n_eos_samples (BaseSamplerConfig attribute) n_epochs (FlowMCSamplerConfig attribute) n_global_steps (FlowMCSamplerConfig attribute) n_high (ChiEFTLikelihood attribute) n_live (BlackJAXNSAWConfig attribute) n_local_steps (FlowMCSamplerConfig attribute) n_loop_production (FlowMCSamplerConfig attribute) n_loop_training (FlowMCSamplerConfig attribute) n_low (ChiEFTLikelihood attribute) N_masses_batch_size (GWLikelihood attribute) (GWLikelihoodResampled attribute) (NICERLikelihood attribute) N_masses_evaluation (GWLikelihood attribute) (GWLikelihoodResampled attribute) (NICERLikelihood attribute) n_mcmc_steps (SMCNUTSSamplerConfig attribute) (SMCRandomWalkSamplerConfig attribute) n_particles (SMCNUTSSamplerConfig attribute) (SMCRandomWalkSamplerConfig attribute) n_points_high (SpectralEOSConfig attribute) n_target (BlackJAXNSAWConfig attribute) nb_CSE (MetamodelCSEEOSConfig attribute) (MetamodelEOSConfig attribute) (SpectralEOSConfig attribute) nb_masses (BaseTOVConfig attribute) nb_n (ChiEFTLikelihood attribute) ndat_CSE (MetamodelCSEEOSConfig attribute) ndat_TOV (BaseTOVConfig attribute) NICERLikelihood (class in jesterTOV.inference.likelihoods.nicer) ns (EOSData attribute) NtoMTransform (class in jesterTOV.inference.base.transform) O offset_calc() (MetaModel_with_peakCSE_EOS_model method) output_dir (BaseSamplerConfig attribute) output_thinning (FlowMCSamplerConfig attribute) P p (Crust property) p0_geom (SpectralDecomposition_EOS_model attribute) p_high (ChiEFTLikelihood attribute) p_low (ChiEFTLikelihood attribute) parameter_names (JesterSampler attribute) (Prior attribute) parse_prior_file() (in module jesterTOV.inference.priors.parser) penalty_causality (ConstraintEOSLikelihood attribute) penalty_gamma (ConstraintGammaLikelihood attribute) penalty_pressure (ConstraintEOSLikelihood attribute) penalty_stability (ConstraintEOSLikelihood attribute) penalty_value (GWLikelihood attribute) (GWLikelihoodResampled attribute) (NICERLikelihood attribute) (RadioTimingLikelihood attribute) plot_diagnostics() (BlackjaxSMCSampler method) posterior (REXLikelihood attribute) posterior() (JesterSampler method) posterior_from_dict() (JesterSampler method) postprocessing (InferenceConfig attribute) PostprocessingConfig (class in jesterTOV.inference.config.schema) print_summary() (BlackJAXNSAWSampler method) (FlowMCSampler method) (JesterSampler method) Prior (class in jesterTOV.inference.base.prior) prior (InferenceConfig attribute) (JesterSampler attribute) prior_dir (PostprocessingConfig attribute) PriorConfig (class in jesterTOV.inference.config.schema) ps (EOSData attribute) psr_name (NICERLikelihood attribute) (RadioTimingLikelihood attribute) R R (TOVSolution attribute) radii (FamilyData attribute) RadioTimingLikelihood (class in jesterTOV.inference.likelihoods.radio) random_walk_sigma (SMCRandomWalkSamplerConfig attribute) REPARAM_L_BASE (SpectralDecomposition_EOS_model attribute) REPARAM_MEAN (SpectralDecomposition_EOS_model attribute) reparametrized (SpectralEOSConfig attribute) REXLikelihood (class in jesterTOV.inference.likelihoods.rex) run_sampling() (in module jesterTOV.inference.run_inference) S sample() (BlackJAXNSAWSampler method) (BlackjaxSMCSampler method) (CombinePrior method) (FlowMCSampler method) (JesterSampler method) (Prior method) sample_transforms (JesterSampler attribute) sampler (FlowMCSampler attribute) (InferenceConfig attribute) (JesterSampler attribute) SamplerOutput (class in jesterTOV.inference.samplers.jester_sampler) samples (SamplerOutput attribute) save() (InferenceResult method) ScalarTensorTOVSolver (class in jesterTOV.tov.scalar_tensor) seed (GWLikelihood attribute) (InferenceConfig attribute) (NICERLikelihood attribute) setup_likelihood() (in module jesterTOV.inference.run_inference) setup_prior() (in module jesterTOV.inference.run_inference) setup_transform() (in module jesterTOV.inference.run_inference) sigma_scale (SpectralEOSConfig attribute) sigmoid() (in module jesterTOV.utils) SMCNUTSSamplerConfig (class in jesterTOV.inference.config.schema) SMCRandomWalkSamplerConfig (class in jesterTOV.inference.config.schema) solve() (AnisotropyTOVSolver method) (GRTOVSolver method) (ScalarTensorTOVSolver method) (TOVSolverBase method) specification_file (PriorConfig attribute) SpectralDecomposition_EOS_model (class in jesterTOV.eos.spectral) SpectralEOSConfig (class in jesterTOV.inference.config.schema) std (RadioTimingLikelihood attribute) summary() (InferenceResult method) T target_acceptance (SMCNUTSSamplerConfig attribute) target_ess (SMCNUTSSamplerConfig attribute) (SMCRandomWalkSamplerConfig attribute) termination_dlogz (BlackJAXNSAWConfig attribute) tov (InferenceConfig attribute) TOVSolution (class in jesterTOV.tov.data_classes) TOVSolverBase (class in jesterTOV.tov.base) train_thinning (FlowMCSamplerConfig attribute) transform_func (NtoMTransform attribute) type (BaseTOVConfig attribute) (BlackJAXNSAWConfig attribute) (FlowMCSamplerConfig attribute) (GRTOVConfig attribute) (MetamodelCSEEOSConfig attribute) (MetamodelEOSConfig attribute) (SMCNUTSSamplerConfig attribute) (SMCRandomWalkSamplerConfig attribute) (SpectralEOSConfig attribute) U u() (MetaModel_EOS_model method) UniformPrior (class in jesterTOV.inference.base.prior) V validate() (Crust class method) validate_base_positive() (BaseSamplerConfig class method) validate_delete_frac() (BlackJAXNSAWConfig class method) validate_file_extension() (PriorConfig class method) validate_fraction() (SMCNUTSSamplerConfig class method) (SMCRandomWalkSamplerConfig class method) validate_likelihoods() (InferenceConfig class method) validate_nb_cse() (MetamodelCSEEOSConfig class method) (MetamodelEOSConfig class method) (SpectralEOSConfig class method) validate_only (InferenceConfig attribute) validate_positive() (BlackJAXNSAWConfig class method) (FlowMCSamplerConfig class method) (SMCNUTSSamplerConfig class method) (SMCRandomWalkSamplerConfig class method) validate_positive_float() (FlowMCSamplerConfig class method) (SMCNUTSSamplerConfig class method) (SMCRandomWalkSamplerConfig class method) validate_seed() (InferenceConfig class method) X xmax (SpectralDecomposition_EOS_model attribute) (UniformPrior attribute) xmin (UniformPrior attribute) Z ZeroLikelihood (class in jesterTOV.inference.likelihoods.combined)
